Data

Samples, downloads & references

Use the sample explorer for experimental metadata, download reusable catalog files, and verify each dataset’s source and release status before analysis.

Data structure

Samples

Filter experimental metadata by species, assay, tissue, condition, project, and source database.

Open sample explorer →

Downloads

Download the canonical species catalog and validated comparative-genomics metadata.

Go to downloads →

Sources & references

Trace assemblies to public accessions or see when a dataset remains restricted or metadata-only.

Go to references →

Downloads

Only files with a verified release path are downloadable. Unpublished assemblies are deliberately marked rather than exposed without permission.

Public metadata

Species catalog

Canonical codes, scientific names, assembly statistics, capabilities, accessions, and references.

Download JSON · Download CSV

Public metadata

Synteny index

Validated pair availability and data-file pointers used by the comparative-genomics viewer.

Download JSON

Source-controlled

Genome sequence files

FASTA, GFF3, CDS, and protein files follow the access status in the catalog below.

Review genome catalog →

Data sources & references

The canonical catalog is the source of truth for this table and the Genome page.

Code / speciesCollectionNuclear accessionOrganelle accessionsReferenceRelease status
Loading references…

Data-use guidance

For records marked Restricted or Metadata only, request permission and confirm citation or authorship terms before redistribution. Public accessions should be cited together with the original source paper.